BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB011H12LP1|AL426292
(809 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig762 1497 0.0
>3x_Contig762
Length = 2085
Score = 1497 bits (751), Expect = 0.0
Identities = 780/791 (98%), Gaps = 2/791 (0%)
Strand = Plus / Plus
Query: 19 tgaatgttttatcgaaaacaaaacagtacaggaattaaaaaagattaacagtaattgatt 78
||||||||||||||| | ||||||||| ||||| ||||||||||||||||||||||||||
Sbjct: 513 tgaatgttttatcgagaccaaaacagttcagga-ttaaaaaagattaacagtaattgatt 571
Query: 79 gtmacttgattaataaaagcctccaaatcactgaataatttctctgtttttaaaaattgt 138
|| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 572 gtcacttgattaataaaagc-tccaaatcactgaataatttctctgtttttaaaaattgt 630
Query: 139 caaatatactctttcactttattattctttgttattttactcgaacccctcagtcgtccg 198
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 631 caaatatactctttcactttattattctttgttattttactcgaacccctcagtcgtccg 690
Query: 199 atcgtattgctattacgaacacgttcctaaaatagatccccttgattattgaaactgcac 258
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 691 atcgtattgctattacgaacacgttcctaaaatagatccccttgattattgaaactgcac 750
Query: 259 gtacacaaaagcacacacatatcacaatgatgcaaagcgatgagcatgaggattttgtag 318
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 751 gtacacaaaagcacacacatatcacaatgatgcaaagcgatgagcatgaggattttgtag 810
Query: 319 ctactttagaatccttcaaagagttgaaatctgggatttctggttctcgtatcagaaaat 378
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 811 ctactttagaatccttcaaagagttgaaatctgggatttctggttctcgtatcagaaaat 870
Query: 379 taacagactatgctgtcaatcacggaaggaacatcgaagcattgttgtcgtttgtgatac 438
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 871 taacagactatgctgtcaatcacggaaggaacatcgaagcattgttgtcgtttgtgatac 930
Query: 439 agtactccaaagagtgtcctccgactcacaaattgggctccttgtatatcgttgattcta 498
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 931 agtactccaaagagtgtcctccgactcacaaattgggctccttgtatatcgttgattcta 990
Query: 499 ttgttagagcattaatgagtaagtcagaaactgtaaaacaagaagaaggcgaagaaggga 558
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 991 ttgttagagcattaatgagtaagtcagaaactgtaaaacaagaagaaggcgaagaaggga 1050
Query: 559 attattttttgaaaggtgtagaactattaaacgataatatacaacccttactaattgatg 618
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1051 attattttttgaaaggtgtagaactattaaacgataatatacaacccttactaattgatg 1110
Query: 619 gtattgaragargtgatccagcccatctagaaaamattcaggagttaataaatatttggg 678
||||||| ||| |||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 1111 gtattgaaagaagtgatccagcccatctagaaaaaattcaggagttaataaatatttggg 1170
Query: 679 ataamvacaacgtttttaacaacaaacctttgaatgcagcaaggagtcgtttgagtgaac 738
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1171 ataaaaacaacgtttttaacaacaaacctttgaatgcagcaaggagtcgtttgagtgaac 1230
Query: 739 ttgtaaatagcaactcgatccctccatcttcgtcatctaattcgtctttaaccccacgcc 798
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1231 ttgtaaatagcaactcgatccctccatcttcgtcatctaattcgtctttaaccccacgcc 1290
Query: 799 cagctcccagt 809
|||||||||||
Sbjct: 1291 cagctcccagt 1301
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6160
Number of Sequences: 1807
Number of extensions: 6160
Number of successful extensions: 51
Number of sequences better than 1.0e-20: 1
length of query: 809
length of database: 10,358,551
effective HSP length: 16
effective length of query: 793
effective length of database: 10,329,639
effective search space: 8191403727
effective search space used: 8191403727
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.2 bits)